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Cited 15 time in webofscience Cited 14 time in scopus
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Sequence discrimination of the Z alpha domain of human ADAR1 during B-Z transition of DNA duplexesopen access

Authors
Seo, Yeo-JinAhn, Hee-ChulLee, Eun-HaeBang, JongchulKang, Young-MinKim, Hee-EunLee, Yeon-MiKim, KyungminChoi, Byong-SeokLee, Joon-Hwa
Issue Date
22-Oct-2010
Publisher
WILEY
Keywords
NMR; Z-DNA; Hydrogen exchange; Z-DNA binding protein; B-Z transition; Non-CG repeat DNA
Citation
FEBS LETTERS, v.584, no.20, pp 4344 - 4350
Pages
7
Indexed
SCI
SCIE
SCOPUS
Journal Title
FEBS LETTERS
Volume
584
Number
20
Start Page
4344
End Page
4350
URI
https://scholarworks.gnu.ac.kr/handle/sw.gnu/24910
DOI
10.1016/j.febslet.2010.09.036
ISSN
0014-5793
1873-3468
Abstract
The Z alpha domain of human ADAR1 (Z alpha(ADAR1)) preferentially binds Z-DNA rather than B-DNA with high binding affinity. Z alpha(ADAR1) binds to the Z-conformation of both non-CG-repeat DNA duplexes and a d(CGCGCG)(2) duplex similarly. We performed NMR experiments on complexes between the Z alpha(ADAR1) and non-CG-repeat DNA duplexes, d(CACGTG)(2) or d(CGTACG)(2), with a variety of protein-DNA molar ratios. Comparison of these results with those from the analysis of d(CGCGCG)(2) in the previous study suggests that Za(ADAR1) exhibits the sequence preference of d(CGCGCG)(2) >> d(CACGTG)(2) > d(CGTACG)(2) through multiple sequence discrimination steps during the B-Z transition. (C)2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.
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