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Cited 5 time in webofscience Cited 6 time in scopus
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Differential expression of olive flounder (Paralichthys olivaceus) transcriptome during viral hemorrhagic septicemia virus (VHSV) infection at warmer and colder temperatureopen access

Authors
Jeong, Ji-MinJeswin, JosephBae, Jin-SolPark, Chan-Il
Issue Date
Aug-2018
Publisher
ELSEVIER SCIENCE BV
Keywords
Paralichthys olivaceus; Olive flounder; Transcriptome; RNA-Seq; Viral hemorrhagic septicemia virus (VHSV); Head kidney
Citation
DATA IN BRIEF, v.19, pp 2023 - 2028
Pages
6
Indexed
SCOPUS
ESCI
Journal Title
DATA IN BRIEF
Volume
19
Start Page
2023
End Page
2028
URI
https://scholarworks.gnu.ac.kr/handle/sw.gnu/11437
DOI
10.1016/j.dib.2018.06.085
ISSN
2352-3409
Abstract
The data presented here are related to the research article entitled "Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)" [1]. In the cited article, we sequenced the whole transcriptome of the olive flounder using Illumina RNA-Seq. Differentially expressed genes (DEG) analysis of VHSV infected head kidney samples showed perturbations in gene expression. Herein we made a comparison of DEGs at early stage of VHSV infection of olive flounder (4h post infection) in colder (13 degrees C) and warmer (20 degrees C) temperatures. The analysis of signaling pathways showed that several major immune pathways were altered. The gene ontology terms associated with the genes differentially expressed are also presented. (C) 2018 The Authors. Published by Elsevier Inc.
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해양과학대학 (해양생명과학과)
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