Salt Dependence of DNA Binding Activity of Human Transcription Factor Dlx3
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초록

Distal-less 3 (Dlx3) is a homeobox-containing transcription factor and plays a crucial role in the development and differentiation process. Human Dlx3 consists of two transactivation domains and a homeobox domain (HD) that selectively binds to the consensus site (5 '-TAATT-3 ') of the DNA duplex. Here, we performed chemical shift perturbation experiments on Dlx3-HD in a complex with a 10-base-paired (10-bp) DNA duplex under various salt conditions. We also acquired the imino proton spectra of the 10-bp DNA to monitor the changes in base-pair stabilities during titration with Dlx3-HD. Our study demonstrates that Dlx3-HD selectively recognizes its consensus DNA sequences through the alpha 3 helix and L1 loop regions with a unique dynamic feature. The dynamic properties of the binding of Dlx3-HD to its consensus DNA sequence can be modulated by varying the salt concentrations. Our study suggested that this unique structural and dynamic feature of Dlx3-HD plays an important role in target DNA recognition, which might be associated with tricho-dento-osseous syndrome.

키워드

transcription factorNMRDNA-protein interactionsalt dependencebase-pair stabilitychemical shift perturbationTRICHODENTOOSSEOUS SYNDROMEMUTATIONDIFFERENTIATIONCOMPLEXGENEHAIR
제목
Salt Dependence of DNA Binding Activity of Human Transcription Factor Dlx3
저자
Jin, Ho-SeongSon, JuyeonSeo, Yeo-JinChoi, Seo-ReeAhn, Hye-BinGo, YouyeonLim, JuheeOh, Kwang-ImRyu, Kyoung-SeokLee, Joon-Hwa
DOI
10.3390/ijms23169497
발행일
2022-08
유형
Article
저널명
International Journal of Molecular Sciences
23
16