A comparative assessment of reference genes in mouse brown adipocyte differentiation and thermogenesis in vitro
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초록

Adipogenic differentiation and thermogenesis in brown adipose tissue (BAT) undergo dynamic processes, altering phenotypes and gene expressions. Proper reference genes in gene expression analysis are crucial to mitigate experimental variances and ensure PCR efficacy. Unreliable reference genes can lead to erroneous gene expression quantification, resulting in data misinterpretation. This study focused on identifying suitable reference genes for mouse brown adipocyte research, utilizing brown adipocytes from the Ucp1-luciferase ThermoMouse model. Comparative analysis of gene expression data under adipogenesis and thermogenesis conditions was conducted, validating 13 housekeeping genes through various algorithms, including DeltaCq, BestKeeper, geNorm, Normfinder, and RefFinder. Tbp and Rer1 emerged as optimal references for Ucp1 and Pparg expression in brown adipogenesis, while Tbp and Ubc were ideal for the expression analysis of these target genes in thermogenesis. Conversely, certain conventional references, including Actb, Tubb5, and Gapdh, proved unstable as reference genes under both conditions. These findings stress the critical consideration of reference gene selection in gene expression analysis within specific biological systems to ensure accurate conclusions.

키워드

Reference genebrown adipocytesUcp1thermogenesisadipocyte differentiationADIPOSE-TISSUEQUANTITATIVE PCREXPRESSION DATAPPAR-GAMMAFATUCP1NORMALIZATIONMODEL
제목
A comparative assessment of reference genes in mouse brown adipocyte differentiation and thermogenesis in vitro
저자
Lai, Trang HuyenHwang, Jin SeokNgo, Quang NhatLee, Dong-KunKim, Hyun JoonKim, Deok Ryong
DOI
10.1080/21623945.2024.2330355
발행일
2024-12
유형
Article
저널명
Adipocyte
13
1