A comparative analysis of single-cell transcriptomic technologies in plants and animals

  • Netla, Vamsidhar Reddy
  • Shinde, Harshraj
  • Kumar, Gulshan
  • Dudhate, Ambika
  • Hong, Jong Chan
  • ... Kadam, Ulhas Sopanrao
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14

초록

The development of sequencing methods has resulted in the investigation of many unexplored research areas. Among the different sequencing methods, single-cell transcriptomics is versatile and has completely changed the researchers' perception of biological processes from tissue to single-cell. Single-cell transcriptomic is applied in various fields to reveal cell-cell interaction, phytopathogenic interactions, cell-specific genetic expression, regulatory pathways, and the effects of drugs on cells. Single-cell transcriptomics was initially applied to the model organisms, such as mice and Arabidopsis thaliana, and then later expanded to other non-model species. Recently, single-cell transcriptomics is revolutionizing plant and animal research. The direct application of single-cell transcriptomics has become simple with advanced sequencing methods and data analysis tools available. This review summarizes the latest knowledge on single-cell transcriptomics in plant and animal research. We emphasize various sequencing methods, bioinformatics software development, comparison between plant and animal single-cell transcriptomics studies, and the limitations and future prospectus. © 2023 The Authors

키워드

BioinformaticsPlantsRegulatory pathwaysSequencingSingle-cell transcriptomicsGENOME-WIDE EXPRESSIONRNA SEQUENCING REVEALSSTOMATAL LINEAGESEQSTATESROOTLEAF
제목
A comparative analysis of single-cell transcriptomic technologies in plants and animals
저자
Netla, Vamsidhar ReddyShinde, HarshrajKumar, GulshanDudhate, AmbikaHong, Jong ChanKadam, Ulhas Sopanrao
DOI
10.1016/j.cpb.2023.100289
발행일
2023-09
유형
Article
저널명
Current Plant Biology
35-36