Sequence discrimination of the Z alpha domain of human ADAR1 during B-Z transition of DNA duplexes
  • Seo, Yeo-Jin
  • Ahn, Hee-Chul
  • Lee, Eun-Hae
  • Bang, Jongchul
  • Kang, Young-Min
  • 외 5명
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초록

The Z alpha domain of human ADAR1 (Z alpha(ADAR1)) preferentially binds Z-DNA rather than B-DNA with high binding affinity. Z alpha(ADAR1) binds to the Z-conformation of both non-CG-repeat DNA duplexes and a d(CGCGCG)(2) duplex similarly. We performed NMR experiments on complexes between the Z alpha(ADAR1) and non-CG-repeat DNA duplexes, d(CACGTG)(2) or d(CGTACG)(2), with a variety of protein-DNA molar ratios. Comparison of these results with those from the analysis of d(CGCGCG)(2) in the previous study suggests that Za(ADAR1) exhibits the sequence preference of d(CGCGCG)(2) >> d(CACGTG)(2) > d(CGTACG)(2) through multiple sequence discrimination steps during the B-Z transition. (C)2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

키워드

NMRZ-DNAHydrogen exchangeZ-DNA binding proteinB-Z transitionNon-CG repeat DNAHANDED Z-DNAHUMAN EDITING ENZYMECRYSTAL-STRUCTUREBINDING DOMAINBASE-PAIRSPROTON-EXCHANGEREVEALSKINETICSCOMPLEXTHERMODYNAMICS
제목
Sequence discrimination of the Z alpha domain of human ADAR1 during B-Z transition of DNA duplexes
저자
Seo, Yeo-JinAhn, Hee-ChulLee, Eun-HaeBang, JongchulKang, Young-MinKim, Hee-EunLee, Yeon-MiKim, KyungminChoi, Byong-SeokLee, Joon-Hwa
DOI
10.1016/j.febslet.2010.09.036
발행일
2010-10-22
유형
Article
저널명
FEBS Letters
584
20
페이지
4344 ~ 4350