Genetic variations underlying root-knot nematode resistance in sweetpotato
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초록

Root-knot nematode (Meloidogyne incognita) causes severe crop damage and large economic losses worldwide. Several cultivars of sweetpotato [Ipomoea batatas (L.) Lam)] have been developed with root-knot nematoderesistant traits; however, many of these cultivars do not have favorable agronomic characteristics. To understand the genetic traits underlying M. incognita resistance in sweetpotato, whole genome resequencing was conducted on three RKN-susceptible (Dahomi, Shinhwangmi, and Yulmi) and three RKN-resistant (Danjami, Pungwonmi, and Juhwangmi) sweetpotato cultivars. Three SNPs (single nucleotide polymorphisms) in promotor sequences were shared in RKN-resistant cultivars and were correlated with disease resistance. One of these SNPs was located in G66171TU10904, which encoded a homolog of RIBOSOMAL PROTEIN EL15Z, and was associated with reduced expression in RKN-resistant cultivars only. Alongside SNP analysis, mRNA-seq data were analyzed for the same cultivars with and without nematode infection, and 18 nematode-sensitive genes were identified that responded in a cultivar-specific manner. Of these genes, expression of G87351TU14367 was lower in sensitive cultivars than in RKN-resistant cultivars. Overall, this study identified two genes that potentially have key roles in the regulation of nematode resistance and will be useful targets for nematode resistance breeding programs.

키워드

Root-knot nematodeSweetpotatoGenetic variationNematode resistanceMELOIDOGYNE-INCOGNITAREAD ALIGNMENTSPORAMININSECTRNADNA
제목
Genetic variations underlying root-knot nematode resistance in sweetpotato
저자
Kim, JaewookSung, Yeon WooYang, Jung-WookNam, Ki JungLee, Kang-LokShim, DonghwanKim, Yun-Hee
DOI
10.1016/j.gene.2024.148895
발행일
2024-12
유형
Article
저널명
Gene
931